BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B12LP1|AL427584
(1056 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 792 0.0
>3x_Contig1794
Length = 36744
Score = 792 bits (373), Expect = 0.0
Identities = 391/401 (97%), Gaps = 1/401 (0%)
Strand = Plus / Plus
Query: 2 aaagaatgatcctcaaataaatttcaatgatacaaatgcaccaccttctgcagtaaacgt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9649 aaagaatgatcctcaaataaatttcaatgatacaaatgcaccaccttctgcagtaaacgt 9708
Query: 62 tbbtgddaatggcaatccaagtagttatctaacgttgaacgatttcaacgmcctcggcat 121
| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9709 tcctgaaaatggcaatccaagtagttatctaacgttgaacgatttcaacgacctcggcat 9768
Query: 122 tgattggaatgcggctaacgacaataatgaattgaatttggaagattttaacatatgatg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9769 tgattggaatgcggctaacgacaataatgaattgaatttggaagattttaacatatgatg 9828
Query: 182 tttgtcatacctcggtatgacatgaattaaccgta-gtctaatataataccgttattgct 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9829 tttgtcatacctcggtatgacatgaattaaccgtaggtctaatataataccgttattgct 9888
Query: 241 ttctaatgctctattctgcatggagtaattggtcaatgaactacgcaactcctttcaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9889 ttctaatgctctattctgcatggagtaattggtcaatgaactacgcaactcctttcaatt 9948
Query: 301 gatttctaaaaaagagctctgcttcaaagaagaacgtattatctaggaagatatgtatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9949 gatttctaaaaaagagctctgcttcaaagaagaacgtattatctaggaagatatgtatat 10008
Query: 361 gcttatatatatatatatdtdtrtatatatatatatatata 401
|||||||||||||||||| | | ||||||||||||| ||||
Sbjct: 10009 gcttatatatatatatatatatatatatatatatatctata 10049
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.724 1.38
Gapped
Lambda K H
1.47 0.724 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 59,805
Number of Sequences: 1807
Number of extensions: 59805
Number of successful extensions: 22606
Number of sequences better than 1.0e-20: 1
length of query: 1056
length of database: 10,358,551
effective HSP length: 15
effective length of query: 1041
effective length of database: 10,331,446
effective search space: 10755035286
effective search space used: 10755035286
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.7 bits)
S1: 11 (23.8 bits)
S2: 47 (100.3 bits)